STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KUR71534.1Tryptophan halogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (501 aa)    
Predicted Functional Partners:
KUR71414.1
Signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.860
KUR71415.1
Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.824
KUR70796.1
Cupin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.811
KUR70795.1
Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.807
KUR71535.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.806
KUR70793.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.780
KUR71416.1
Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.778
AQZ52_13485
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.749
KUR70836.1
1,4-beta-D-glucan glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
KUR70908.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
Your Current Organism:
Novosphingobium fuchskuhlense
NCBI taxonomy Id: 1117702
Other names: CCM 7978, CCUG 61508, DSM 25065, N. fuchskuhlense, Novosphingobium fuchskuhlense Glaeser et al. 2013, Novosphingobium sp. FNE08-7, strain FNE08-7
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