STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO54406.1Hypothetical protein. (122 aa)    
Predicted Functional Partners:
SHO54405.1
Hypothetical protein.
       0.709
SHO54407.1
Hypothetical protein.
       0.596
SHO54408.1
Hypothetical protein.
       0.596
SHO54409.1
Hypothetical protein.
       0.596
SHO54410.1
Chromosome segregation protein.
       0.596
SHO54411.1
Hypothetical protein.
       0.588
SHO54412.1
Hypothetical protein.
       0.588
SHO54413.1
Hypothetical protein.
       0.588
SHO54414.1
Fibronectin type III protein.
       0.588
SHO54415.1
Hypothetical protein.
       0.588
Your Current Organism:
Vibrio quintilis
NCBI taxonomy Id: 1117707
Other names: CECT 7734, KCTC 23833, V. quintilis, Vibrio quintilis Lucena et al. 2013, Vibrio sp. CECT 7734, strain M62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.