Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO55704.1 | SHO55706.1 | VQ7734_01450 | VQ7734_01452 | Flagellar assembly protein H. | Flagellar biosynthesis chaperone. | 0.798 |
SHO55704.1 | SHO55707.1 | VQ7734_01450 | VQ7734_01453 | Flagellar assembly protein H. | Hypothetical protein. | 0.605 |
SHO55704.1 | fliE-2 | VQ7734_01450 | VQ7734_01447 | Flagellar assembly protein H. | Flagellar hook-basal body protein FliE. | 0.980 |
SHO55704.1 | fliF_1 | VQ7734_01450 | VQ7734_01448 | Flagellar assembly protein H. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.984 |
SHO55704.1 | fliG_1 | VQ7734_01450 | VQ7734_01449 | Flagellar assembly protein H. | Flagellar motor switch protein FliG. | 0.986 |
SHO55704.1 | fliI_1 | VQ7734_01450 | VQ7734_01451 | Flagellar assembly protein H. | Flagellum-specific ATP synthase. | 0.992 |
SHO55704.1 | yiaD_2 | VQ7734_01450 | VQ7734_01445 | Flagellar assembly protein H. | Putative lipoprotein YiaD precursor. | 0.743 |
SHO55704.1 | zraR_3 | VQ7734_01450 | VQ7734_01446 | Flagellar assembly protein H. | Transcriptional regulatory protein ZraR. | 0.903 |
SHO55706.1 | SHO55704.1 | VQ7734_01452 | VQ7734_01450 | Flagellar biosynthesis chaperone. | Flagellar assembly protein H. | 0.798 |
SHO55706.1 | SHO55707.1 | VQ7734_01452 | VQ7734_01453 | Flagellar biosynthesis chaperone. | Hypothetical protein. | 0.605 |
SHO55706.1 | fliE-2 | VQ7734_01452 | VQ7734_01447 | Flagellar biosynthesis chaperone. | Flagellar hook-basal body protein FliE. | 0.800 |
SHO55706.1 | fliF_1 | VQ7734_01452 | VQ7734_01448 | Flagellar biosynthesis chaperone. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.798 |
SHO55706.1 | fliG_1 | VQ7734_01452 | VQ7734_01449 | Flagellar biosynthesis chaperone. | Flagellar motor switch protein FliG. | 0.798 |
SHO55706.1 | fliI_1 | VQ7734_01452 | VQ7734_01451 | Flagellar biosynthesis chaperone. | Flagellum-specific ATP synthase. | 0.796 |
SHO55706.1 | yiaD_2 | VQ7734_01452 | VQ7734_01445 | Flagellar biosynthesis chaperone. | Putative lipoprotein YiaD precursor. | 0.766 |
SHO55706.1 | zraR_3 | VQ7734_01452 | VQ7734_01446 | Flagellar biosynthesis chaperone. | Transcriptional regulatory protein ZraR. | 0.742 |
SHO55707.1 | SHO55704.1 | VQ7734_01453 | VQ7734_01450 | Hypothetical protein. | Flagellar assembly protein H. | 0.605 |
SHO55707.1 | SHO55706.1 | VQ7734_01453 | VQ7734_01452 | Hypothetical protein. | Flagellar biosynthesis chaperone. | 0.605 |
SHO55707.1 | fliE-2 | VQ7734_01453 | VQ7734_01447 | Hypothetical protein. | Flagellar hook-basal body protein FliE. | 0.605 |
SHO55707.1 | fliF_1 | VQ7734_01453 | VQ7734_01448 | Hypothetical protein. | Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.605 |
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