STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHO56811.1Dinitrogenase iron-molybdenum cofactor. (162 aa)    
Predicted Functional Partners:
nifK_1
Nitrogenase molybdenum-iron protein beta chain; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.972
nifD_1
Nitrogenase molybdenum-iron protein alpha chain; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.970
fdxB
Ferredoxin-3.
 
  
 0.955
nifH1
Nitrogenase iron protein 1; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
  
 0.930
nifK_2
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
 
 0.900
nifD_2
Nitrogenase molybdenum-iron protein alpha chain.
 
 
 0.900
SHO56817.1
NifT/FixU protein.
 
  
 0.855
SHO56816.1
Dinitrogenase iron-molybdenum cofactor.
 
     0.839
SHO56797.1
NifQ.
 
  
 0.823
nifB
FeMo cofactor biosynthesis protein NifB.
 
  
 0.816
Your Current Organism:
Vibrio quintilis
NCBI taxonomy Id: 1117707
Other names: CECT 7734, KCTC 23833, V. quintilis, Vibrio quintilis Lucena et al. 2013, Vibrio sp. CECT 7734, strain M62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.