STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mbtB_2Phenyloxazoline synthase MbtB. (1838 aa)    
Predicted Functional Partners:
srfAC
Surfactin synthase subunit 3.
 
0.999
tycC_1
Tyrocidine synthase 3.
 
0.999
ppsE
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE.
 0.999
mbtB_1
Phenyloxazoline synthase MbtB.
 
0.999
lgrB
Linear gramicidin synthase subunit B.
 
0.999
vibB
Vibriobactin-specific isochorismatase.
 
 
 0.999
dhbF_4
Dimodular nonribosomal peptide synthase; Belongs to the ATP-dependent AMP-binding enzyme family.
 
0.999
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.997
lgrE_2
Linear gramicidin dehydrogenase LgrE.
 
 0.997
dhbE
2,3-dihydroxybenzoate-AMP ligase.
 
0.991
Your Current Organism:
Vibrio quintilis
NCBI taxonomy Id: 1117707
Other names: CECT 7734, KCTC 23833, V. quintilis, Vibrio quintilis Lucena et al. 2013, Vibrio sp. CECT 7734, strain M62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.