Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHO54371.1 | SHO55112.1 | VQ7734_00085 | VQ7734_00831 | Hypothetical protein. | Peptidase S24-like protein. | 0.426 |
SHO54371.1 | SHO56269.1 | VQ7734_00085 | VQ7734_02038 | Hypothetical protein. | Type III restriction enzyme, res subunit. | 0.848 |
SHO54371.1 | SHO56395.1 | VQ7734_00085 | VQ7734_02164 | Hypothetical protein. | Type I restriction enzyme EcoKI subunit R. | 0.848 |
SHO54371.1 | SHO57104.1 | VQ7734_00085 | VQ7734_02873 | Hypothetical protein. | Bacteriophage CI repressor helix-turn-helix domain protein. | 0.426 |
SHO54371.1 | SHO57863.1 | VQ7734_00085 | VQ7734_03633 | Hypothetical protein. | Hypothetical protein. | 0.520 |
SHO54371.1 | SHO58149.1 | VQ7734_00085 | VQ7734_03919 | Hypothetical protein. | Bacteriophage CI repressor helix-turn-helix domain protein. | 0.426 |
SHO54371.1 | SHO58746.1 | VQ7734_00085 | VQ7734_04518 | Hypothetical protein. | Type III restriction enzyme, res subunit. | 0.848 |
SHO55112.1 | SHO54371.1 | VQ7734_00831 | VQ7734_00085 | Peptidase S24-like protein. | Hypothetical protein. | 0.426 |
SHO55112.1 | SHO56395.1 | VQ7734_00831 | VQ7734_02164 | Peptidase S24-like protein. | Type I restriction enzyme EcoKI subunit R. | 0.686 |
SHO55112.1 | SHO57863.1 | VQ7734_00831 | VQ7734_03633 | Peptidase S24-like protein. | Hypothetical protein. | 0.519 |
SHO55112.1 | SHO58746.1 | VQ7734_00831 | VQ7734_04518 | Peptidase S24-like protein. | Type III restriction enzyme, res subunit. | 0.686 |
SHO56269.1 | SHO54371.1 | VQ7734_02038 | VQ7734_00085 | Type III restriction enzyme, res subunit. | Hypothetical protein. | 0.848 |
SHO56269.1 | SHO57863.1 | VQ7734_02038 | VQ7734_03633 | Type III restriction enzyme, res subunit. | Hypothetical protein. | 0.548 |
SHO56395.1 | SHO54371.1 | VQ7734_02164 | VQ7734_00085 | Type I restriction enzyme EcoKI subunit R. | Hypothetical protein. | 0.848 |
SHO56395.1 | SHO55112.1 | VQ7734_02164 | VQ7734_00831 | Type I restriction enzyme EcoKI subunit R. | Peptidase S24-like protein. | 0.686 |
SHO56395.1 | SHO57863.1 | VQ7734_02164 | VQ7734_03633 | Type I restriction enzyme EcoKI subunit R. | Hypothetical protein. | 0.571 |
SHO57104.1 | SHO54371.1 | VQ7734_02873 | VQ7734_00085 | Bacteriophage CI repressor helix-turn-helix domain protein. | Hypothetical protein. | 0.426 |
SHO57104.1 | SHO57863.1 | VQ7734_02873 | VQ7734_03633 | Bacteriophage CI repressor helix-turn-helix domain protein. | Hypothetical protein. | 0.579 |
SHO57104.1 | SHO58779.1 | VQ7734_02873 | VQ7734_04551 | Bacteriophage CI repressor helix-turn-helix domain protein. | Prokaryotic dksA/traR C4-type zinc finger. | 0.558 |
SHO57859.1 | SHO57863.1 | VQ7734_03629 | VQ7734_03633 | Phage regulatory protein CII (CP76). | Hypothetical protein. | 0.589 |
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