STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sglTSodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (589 aa)    
Predicted Functional Partners:
putA
Bifunctional protein PutA; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
  
 0.947
barA_1
Signal transduction histidine-protein kinase BarA.
  
 0.903
arcB_2
Aerobic respiration control sensor protein ArcB.
  
 
 0.814
luxU
Phosphorelay protein LuxU.
    
 0.780
barA_2
Signal transduction histidine-protein kinase BarA.
    
 0.756
arcB_1
Aerobic respiration control sensor protein ArcB.
  
 
 0.753
rcsC_2
Sensor histidine kinase RcsC.
  
 
 0.753
yjiY
Inner membrane protein YjiY.
 
    0.739
cph2_6
Phytochrome-like protein cph2.
  
 
 0.724
tcyC_2
L-cystine import ATP-binding protein TcyC.
  
  
 0.662
Your Current Organism:
Vibrio quintilis
NCBI taxonomy Id: 1117707
Other names: CECT 7734, KCTC 23833, V. quintilis, Vibrio quintilis Lucena et al. 2013, Vibrio sp. CECT 7734, strain M62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.