STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ33797.1PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: cyc:PCC7424_3921 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Aminotransferase class V. (426 aa)    
Predicted Functional Partners:
AFZ34869.1
PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR010230:IPR003439:IPR003593; KEGG: cyc:PCC7424_4730 FeS assembly ATPase SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: FeS assembly ATPase SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly.
 
  
 0.788
AFZ37606.1
PFAM: Fe-S metabolism associated domain; COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: cyc:PCC7424_3953 Fe-S metabolism associated SufE; PFAM: Fe-S metabolism associated SufE; SPTR: Fe-S metabolism associated SufE.
  
 
 0.688
AFZ35004.1
Iron-regulated ABC transporter membrane component SufB; PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR010231:IPR000825; KEGG: cyp:PCC8801_0415 cysteine desulfurase activator complex subunit SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufB; TIGRFAM: SUF system FeS cluster assembly, SufB.
 
 
 0.681
AFZ34868.1
PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR011542:IPR000825; KEGG: cyc:PCC7424_4731 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD.
 
 
 0.669
AFZ34867.1
Cysteine desulfurase; PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufSfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR010970:IPR000192; KEGG: cyp:PCC8801_0418 cysteine desulfurase, SufS subfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Selenocysteine lyase; SPTR: Cysteine desulfurase, SufS subfamily; TIGRFAM: Cysteine desulfurase, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
     0.595
AFZ37734.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein, VC1184 subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR011340:IPR000192; KEGG: ana:alr3867 hypothetical protein; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Alr3867 protein; TIGRFAM: Cysteine desulfurase-related.
  
     0.421
AFZ34701.1
PFAM: Acyl transferase domain; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Aminotransferase class I and II; Zinc-binding dehydrogenase; TIGRFAM: 8-amino-7-oxononanoate synthase; malonyl CoA-acyl carrier protein transacylase; COGs: COG3321 Polyketide synthase modules and related protein; InterProIPR014030:IPR014031:IPR014043:IPR013154:IPR 013149:IPR013968:IPR006163:IPR004839; KEGG: npu:Npun_F3360 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-termina [...]
  
 
 0.419
AFZ33798.1
PFAM: Spermine/spermidine synthase; Major Facilitator Superfamily; COGs: COG0421 Spermidine synthase; InterPro IPR001045; KEGG: rrs:RoseRS_1363 spermine synthase; PFAM: Spermine synthase; SPTR: Spermine synthase.
       0.401
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.