STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ33949.1Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: syp:SYNPCC7002_A1802 carbon dioxide concentrating mechanism protein; PFAM: Microcompartment protein, bacteria; SPTR: Carbon dioxide-concentrating mechanism protein CcmK. (112 aa)    
Predicted Functional Partners:
AFZ33948.1
PFAM: Ethanolamine utilisation protein EutN/carboxysome; COGs: COG4576 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR004992; KEGG: cyc:PCC7424_1370 ethanolamine utilization protein EutN/carboxysome structural protein CcmL; PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; SPTR: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml.
 
 
 
 0.989
AFZ33947.1
Carbonate dehydratase; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide (three repeats); COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451:IPR000894; KEGG: cyt:cce_4280 carbon dioxide concentrating mechanism protein; PFAM: Ribulose bisphosphate carboxylase, small chain; Bacterial transferase hexapeptide repeat; PRIAM: Carbonate dehydratase; SPTR: Carbon dioxide concentrating mechanism protein.
   
 
 0.719
AFZ33950.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyc:PCC7424_1372 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein.
 
 
  
0.701
AFZ36343.1
Microcompartments protein; PFAM: BMC domain; InterPro IPR000249; KEGG: cyc:PCC7424_3094 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein.
 
 
   0.697
AFZ33951.1
Microcompartments protein; PFAM: BMC domain; COGs: COG4577 Carbon dioxide concentrating mechanism/carboxysome shell protein; InterPro IPR000249; KEGG: cyc:PCC7424_1373 microcompartments protein; PFAM: Microcompartment protein, bacteria; SPTR: Microcompartments protein.
 
 
  
0.602
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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