STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34205.1KEGG: cyc:PCC7424_4615 hypothetical protein; SPTR: Putative uncharacterized protein. (91 aa)    
Predicted Functional Partners:
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
 
      0.900
AFZ34206.1
KEGG: cyt:cce_3998 hypothetical protein; SPTR: Putative uncharacterized protein.
 
 
   0.875
AFZ36612.1
PFAM: Recombinase; InterPro IPR011109; KEGG: cyc:PCC7424_3086 recombinase; PFAM: Recombinase; SPTR: Recombinase; manually curated.
 
   
 0.784
AFZ36714.1
KEGG: cyc:PCC7424_5144 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.782
AFZ36594.1
Heat shock protein DnaJ domain protein; PFAM: DnaJ domain; InterPro IPR001623:IPR019734:IPR001440; KEGG: cyh:Cyan8802_0556 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; Tetratricopeptide TPR-1; SMART: Heat shock protein DnaJ, N-terminal; Tetratricopeptide repeat; SPTR: Putative uncharacterized protein.
 
     0.776
AFZ36386.1
PFAM: Protein of unknown function (DUF2949); KEGG: naz:Aazo_0105 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
AFZ36758.1
KEGG: cyc:PCC7424_3303 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.775
AFZ34920.1
KEGG: cyh:Cyan8802_1508 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.774
AFZ34403.1
PFAM: Protein of unknown function (DUF2949); KEGG: cyc:PCC7424_0922 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFZ35494.1
KEGG: npu:Npun_R5760 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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