STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34474.1KEGG: npu:Npun_F0152 hypothetical protein; SPTR: Putative uncharacterized protein. (179 aa)    
Predicted Functional Partners:
AFZ34964.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD-like; SPTR: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.432
AFZ34965.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ava:Ava_4678 CsbD-like; PFAM: CsbD-like; SPTR: CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.432
AFZ34966.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: npu:Npun_R3254 CsbD family protein; PFAM: CsbD-like; SPTR: CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
    0.432
AFZ36705.1
CsbD family protein; PFAM: CsbD-like; InterPro IPR008462; KEGG: ana:asr1134 hypothetical protein; PFAM: CsbD-like; SPTR: UPF0337 protein asr1134; Belongs to the UPF0337 (CsbD) family.
  
    0.432
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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