STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34540.1Chorismate synthase; PFAM: CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR008213; KEGG: gvi:gvip183 phycoerythrin-associated linker protein; PFAM: Phycobilisome linker domain; CpcD phycobilisome linker like; SPTR: Phycoerythrin-associated linker protein; Belongs to the phycobilisome linker protein family. (253 aa)    
Predicted Functional Partners:
AFZ34863.1
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 
 0.911
AFZ36480.1
PFAM: CpcD/allophycocyanin linker domain; InterPro IPR008213; KEGG: cyp:PCC8801_3078 CpcD phycobilisome linker domain protein; PFAM: CpcD phycobilisome linker like; SPTR: CpcD phycobilisome linker domain protein.
 
 
 
 0.891
AFZ33868.1
Phycocyanin, alpha subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, alpha subunit; InterPro IPR006246:IPR012128; KEGG: syn:sll1578 phycocyanin A subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycocyanin, alpha subunit; TIGRFAM: Phycocyanin, alpha subunit.
 
 
 
 0.883
AFZ36477.1
Phycocyanin, alpha subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, alpha subunit; InterPro IPR006246:IPR012128; KEGG: syn:sll1578 phycocyanin A subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycocyanin, alpha subunit; TIGRFAM: Phycocyanin, alpha subunit.
 
 
 
 0.883
AFZ33867.1
Phycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, beta subunit; InterPro IPR006247:IPR012128; KEGG: cyn:Cyan7425_1697 phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Beta-phycocyanin; TIGRFAM: Phycocyanin, beta subunit.
 
 
 
 0.881
AFZ36476.1
Phycocyanin, beta subunit; PFAM: Phycobilisome protein; TIGRFAM: phycocyanin, beta subunit; InterPro IPR006247:IPR012128; KEGG: cyn:Cyan7425_1697 phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Beta-phycocyanin; TIGRFAM: Phycocyanin, beta subunit.
 
 
 
 0.881
AFZ36857.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: ter:Tery_0996 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
 
 
 
 0.878
AFZ36858.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: syx:SynWH7803_0485 C-phycoerythrin class I beta chain; PFAM: Phycobilisome, alpha/beta subunit; SPTR: C-phycoerythrin class 1 subunit beta.
 
 
 
 0.878
AFZ34864.1
PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR006245:IPR012128; KEGG: cyc:PCC7424_2635 allophycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin, beta subunit; TIGRFAM: Allophycocyanin, beta subunit.
  
 
 
 0.868
AFZ35489.1
PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR012128:IPR006245; KEGG: cyc:PCC7424_2202 allophycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin, beta subunit; TIGRFAM: Allophycocyanin, beta subunit.
  
 
 
 0.868
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.