STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34672.1PFAM: Protein-arginine deiminase (PAD); Protein-arginine deiminase (PAD) middle domain; InterPro IPR013733:IPR013530; KEGG: cyc:PCC7424_4763 protein-arginine deiminase; PFAM: Protein-arginine deiminase, C-terminal; Protein-arginine deiminase (PAD), central domain; PRIAM: Protein-arginine deiminase; SPTR: Protein-arginine deiminase. (664 aa)    
Predicted Functional Partners:
AFZ36067.1
PFAM: Heme oxygenase; COGs: COG5398 Heme oxygenase; InterPro IPR016053; KEGG: cyh:Cyan8802_1414 heme oxygenase; PFAM: Haem oxygenase-like; PRIAM: Heme oxygenase; SPTR: Heme oxygenase.
  
     0.715
AFZ35241.1
Pleckstrin/ G-protein interacting- domain protein; PFAM: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); InterPro IPR000591; KEGG: amr:AM1_3246 mechanosensitive ion channel; PFAM: DEP domain; SMART: DEP domain; SPTR: Mechanosensitive ion channel.
  
     0.693
AFZ34503.1
Beta-N-acetylhexosaminidase; PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cyc:PCC7424_1868 glycoside hydrolase family 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Glycoside hydrolase family 3 domain protein.
  
  
 0.661
AFZ35532.1
TROVE domain-containing protein; PFAM: TROVE domain; InterPro IPR008858; KEGG: cyc:PCC7424_4359 TROVE domain protein; PFAM: TROVE; SPTR: TROVE domain protein.
  
     0.652
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
  
  
 0.565
ybeY
Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
 
   
 0.450
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
  
  
 0.431
AFZ37324.1
(+)-abscisic acid 8'-hydroxylase; PFAM: Cytochrome P450; COGs: COG2124 Cytochrome P450; InterPro IPR001128; KEGG: cyc:PCC7424_2680 cytochrome P450; PFAM: Cytochrome P450; PRIAM: (+)-abscisic acid 8'-hydroxylase; SPTR: Cytochrome P450 superfamily.
  
     0.427
AFZ36187.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: cyt:cce_3053 biopolymer transport protein ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative biopolymer transport protein, ExbD/TolR family; TC 2.C.1.1.1.
  
 
 0.425
AFZ36550.1
PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: cyt:cce_1115 biopolymer transport protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein.
  
 
 0.425
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.