STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34751.1PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: cyh:Cyan8802_1415 PBS lyase heat domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein. (220 aa)    
Predicted Functional Partners:
cpcS-4
Phycobilin lyase, CpcU subunit; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.790
AFZ33872.1
HEAT domain containing protein; PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155:IPR000357; KEGG: cyp:PCC8801_3073 heat domain containing protein; PFAM: HEAT; PBS lyase HEAT-like repeat; SPTR: HEAT domain containing protein.
  
   
 0.724
AFZ35116.1
Allophycocyanin alpha-B subunit apoprotein; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyt:cce_3571 allophycocyanin-B; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
  
     0.723
AFZ33963.1
HEAT domain containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR000357; KEGG: cyc:PCC7424_2038 PBS lyase heat domain protein repeat-containing protein; PFAM: HEAT; PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein.
  
     0.719
AFZ34866.1
PFAM: Phycobilisome protein; Phycobilisome Linker polypeptide; InterPro IPR012128:IPR001297; KEGG: cyh:Cyan8802_2095 phycobilisome linker polypeptide; PFAM: Phycobilisome linker domain; Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
   
 0.718
AFZ34863.1
Phycobilisome core linker protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.715
AFZ35489.1
PFAM: Phycobilisome protein; TIGRFAM: allophycocyanin, beta subunit; InterPro IPR012128:IPR006245; KEGG: cyc:PCC7424_2202 allophycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Allophycocyanin, beta subunit; TIGRFAM: Allophycocyanin, beta subunit.
  
   
 0.693
cpcT-3
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.680
AFZ33870.1
PFAM: CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide; InterPro IPR001297:IPR008213; KEGG: cyc:PCC7424_0158 phycobilisome linker polypeptide; PFAM: Phycobilisome linker domain; CpcD phycobilisome linker like; SPTR: Phycobilisome linker polypeptide; Belongs to the phycobilisome linker protein family.
  
     0.676
AFZ35419.1
KEGG: cyn:Cyan7425_0688 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.675
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.