STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ34891.1InterPro IPR001440:IPR019734; KEGG: cyc:PCC7424_3039 tetratricopeptide domain protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Tetratricopeptide TPR_2 repeat protein. (398 aa)    
Predicted Functional Partners:
AFZ34634.1
KEGG: syp:SYNPCC7002_A2520 hypothetical protein; SPTR: Conserved hypothetical membrane protein.
  
     0.761
AFZ33680.1
PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: cyc:PCC7424_0097 protein of unknown function DUF1239; PFAM: Lipopolysccharide-assembly, LptC-related; SPTR: Putative uncharacterized protein.
  
   
 0.760
AFZ37330.1
KEGG: ava:Ava_1696 hypothetical protein; SPTR: All4006 protein.
  
     0.755
AFZ35896.1
KEGG: cyh:Cyan8802_1195 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.746
AFZ35245.1
KEGG: cyc:PCC7424_0606 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.741
AFZ34407.1
PFAM: Protein of unknown function (DUF3153); KEGG: cyc:PCC7424_3421 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.722
AFZ34977.1
KEGG: cyc:PCC7424_1048 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.719
AFZ34598.1
KEGG: syn:slr0420 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.718
AFZ36911.1
Peptidase metallopeptidase; PFAM: Matrixin; COGs: COG5549 Zn-dependent protease; InterPro IPR006026; KEGG: cyh:Cyan8802_2313 peptidase metallopeptidase; SMART: Peptidase, metallopeptidase; SPTR: Peptidase metallopeptidase.
  
     0.696
AFZ35920.1
PFAM: Protein of unknown function (DUF1049); KEGG: cyt:cce_0816 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.688
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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