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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35226.1PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; COGs: COG3608 deacylase; InterPro IPR007036; KEGG: msl:Msil_3423 succinylglutamate desuccinylase/aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Succinylglutamate desuccinylase/aspartoacylase. (351 aa)    
Predicted Functional Partners:
AFZ35219.1
Multi-sensor signal transduction histidine kinase; PFAM: HAMP domain; Cache domain; GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG5002 Signal transduction histidine kinase; InterProIPR003660:IPR000014:IPR001610:IPR003018:IPR 003661:IPR003594:IPR013767:IPR013655; KEGG: cyt:cce_3558 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; HAMP linker domain; P [...]
 
     0.682
AFZ35217.1
PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: mac:MA2503 transmembrane efflux protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Transmembrane efflux protein.
  
     0.632
AFZ35225.1
Cl- channel voltage-gated family protein; PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: cyt:cce_4380 putative Cl-channel, voltage gated; PFAM: Chloride channel, voltage gated; SPTR: Putative Cl-channel, voltage gated.
 
     0.535
AFZ35607.1
PFAM: Protein of unknown function (DUF785); COGs: COG4067 conserved hypothetical protein; InterPro IPR008503; KEGG: cyc:PCC7424_0613 protein of unknown function DUF785; PFAM: Protein of unknown function DUF785; SPTR: Putative uncharacterized protein.
 
     0.516
rimK
Ribosomal protein S6 modification protein; PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); HAMAP: Ribosomal protein S6 modification protein; InterPro IPR013651:IPR004666; KEGG: cyh:Cyan8802_0619 alpha-L-glutamate ligase, RimK family; PFAM: ATP-grasp fold, RimK-type; SPTR: Alpha-L-glutamate ligase, RimK family; TIGRFAM: S6 modification enzyme RimK; Belongs to the RimK family.
 
     0.511
AFZ34275.1
Hypothetical protein; COGs: COG4449 protease of the Abi (CAAX) family; KEGG: npu:Npun_F3459 abortive infection protein; SPTR: Putative uncharacterized protein.
  
     0.455
AFZ36280.1
Hypothetical protein; PFAM: Trypsin; COGs: COG3591 V8-like Glu-specific endopeptidase; KEGG: sil:SPO2645 S2 family protease; SPTR: Glutamyl endopeptidase.
  
     0.421
arcA
Arginine deiminase; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase; COGs: COG2235 Arginine deiminase; HAMAP: Arginine deiminase; InterPro IPR003198:IPR003876; KEGG: sus:Acid_5795 arginine deiminase; PFAM: Amidinotransferase; PRIAM: Arginine deiminase; SPTR: Arginine deiminase; TIGRFAM: Arginine deiminase.
 
     0.412
AFZ35216.1
PFAM: Protein of unknown function (DUF3611); KEGG: cyn:Cyan7425_1801 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.401
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (34%) [HD]
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