STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35350.1KEGG: cyc:PCC7424_1323 hypothetical protein; SPTR: Putative uncharacterized protein. (115 aa)    
Predicted Functional Partners:
AFZ34101.1
SpoVT/AbrB domain-containing protein; PFAM: SpoVT / AbrB like domain; COGs: COG4456 Virulence-associated protein and related protein; InterPro IPR007159; KEGG: rrs:RoseRS_3906 SpoVT/AbrB domain-containing protein; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: SpoVT/AbrB domain protein.
  
 
 0.703
AFZ35351.1
KEGG: cyc:PCC7424_1996 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.426
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.