STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35466.1Protein of unknown function DUF151; PFAM: Uncharacterised ACR, COG1259; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: cyh:Cyan8802_1249 protein of unknown function DUF151; PFAM: Protein of unknown function DUF151; SPTR: Putative uncharacterized protein. (167 aa)    
Predicted Functional Partners:
AFZ35465.1
PFAM: Aldo/keto reductase family; COGs: COG1453 oxidoreductase of the aldo/keto reductase family; InterPro IPR001395; KEGG: cyh:Cyan8802_3197 aldo/keto reductase; PFAM: Aldo/keto reductase; SPTR: Oxidoreductase, aldo/keto reductase family.
       0.610
AFZ35467.1
PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: cyc:PCC7424_0243 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein.
       0.467
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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