STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35469.1PFAM: Glycosyl transferase family 2; TIGRFAM: hopene-associated glycosyltransferase HpnB; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173:IPR017832; KEGG: cyc:PCC7424_3050 hopene-associated glycosyltransferase HpnB; PFAM: Glycosyl transferase, family 2; SPTR: Hopene-associated glycosyltransferase HpnB; TIGRFAM: Glycosyl transferase, family 2, hopene-associated, HpnB. (385 aa)    
Predicted Functional Partners:
AFZ36269.1
Hopanoid-associated sugar epimerase; PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: hopanoid-associated sugar epimerase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR017829; KEGG: ter:Tery_3280 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; TIGRFAM: Hopanoid-associated sugar epimerase.
  
    0.779
AFZ37418.1
Squalene-hopene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase; COGs: COG1657 Squalene cyclase; InterPro IPR006400:IPR018333:IPR001330; KEGG: npu:Npun_R6245 squalene/oxidosqualene cyclase; PFAM: Prenyltransferase/squalene oxidase; PRIAM: Squalene--hopene cyclase; SPTR: Squalene/oxidosqualene cyclase; TIGRFAM: Hopene cyclase; Squalene cyclase.
 
     0.775
AFZ34922.1
PFAM: Radical SAM superfamily; Domain of unknown function (DUF3463); TIGRFAM: hopanoid biosynthesis associated radical SAM protein HpnH; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR017833:IPR007197; KEGG: cyc:PCC7424_3457 hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Radical SAM; SPTR: Similar to tr|Q4BYV8|Q4BYV8_CROWT Radical SAM; TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH.
  
     0.774
AFZ37061.1
PFAM: Phosphorylase superfamily; KEGG: cyn:Cyan7425_4823 purine or other phosphorylase family 1; SPTR: Purine or other phosphorylase family 1.
  
    0.603
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
       0.512
AFZ35250.1
PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: cyc:PCC7424_1894 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; SPTR: Squalene/phytoene synthase.
  
    0.508
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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