STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35574.1PFAM: Pentapeptide repeats (8 copies); COGs: COG1357 Uncharacterized low-complexity protein; InterPro IPR001646; KEGG: cyc:PCC7424_5734 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein. (284 aa)    
Predicted Functional Partners:
AFZ37375.1
PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: cyc:PCC7424_2954 pentapeptide repeat protein; PFAM: Pentapeptide repeat; SPTR: Pentapeptide repeat protein.
  
     0.553
AFZ35573.1
UBA/THIF-type NAD/FAD binding protein; PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901:IPR001763; KEGG: cyc:PCC7424_3386 hypothetical protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like; SPTR: UBA/THIF-type NAD/FAD binding protein.
       0.480
AFZ37758.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: ter:Tery_0990 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT-like repeat.
 
     0.464
AFZ35575.1
PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160; KEGG: syn:sll1673 regulatory components of sensory transduction system; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; SPTR: Regulatory components of sensory transduction system; TIGRFAM: Diguanylate cyclase, predicted.
       0.424
AFZ36551.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyc:PCC7424_5726 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
  
     0.422
AFZ36856.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: Adaptin N terminal region; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR000357; KEGG: npu:Npun_R3805 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; HEAT; SPTR: PBS lyase HEAT domain protein repeat-containing protein CpeZ.
  
     0.407
AFZ37757.1
HEAT domain containing protein; InterPro IPR004155:IPR000357; KEGG: gvi:gvip157 putative phycoerythrin lyase subunit; PFAM: HEAT; PBS lyase HEAT-like repeat; SPTR: CpeZ protein.
  
     0.405
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.