STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35692.1Carotene isomerase; PFAM: FAD dependent oxidoreductase; TIGRFAM: phytoene desaturase; carotene isomerase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR006076:IPR014101; KEGG: cyp:PCC8801_1308 carotene isomerase; PFAM: FAD dependent oxidoreductase; PRIAM: All-trans-retinol 13,14-reductase; SPTR: Carotene isomerase; TIGRFAM: Carotene isomerase. (506 aa)    
Predicted Functional Partners:
AFZ34452.1
Zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
 
  
 0.964
AFZ37766.1
KEGG: cyh:Cyan8802_0567 FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase.
 
 
 0.944
AFZ37407.1
Hypothetical protein; COGs: COG0644 Dehydrogenase (flavoprotein); KEGG: cyc:PCC7424_3550 hypothetical protein; SPTR: Putative uncharacterized protein.
   
 
 0.901
AFZ36797.1
PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: cyh:Cyan8802_0309 phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthase.
  
 0.834
AFZ36798.1
Phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG3349 conserved hypothetical protein; InterPro IPR014102:IPR002937; KEGG: ava:Ava_4795 zeta-carotene desaturase / three-step phytoene desaturase; PFAM: Amine oxidase; PRIAM: Carotene 7,8-desaturase; SPTR: Zeta-carotene desaturase / three-step phytoene desaturase; TIGRFAM: Phytoene desaturase.
 
   
 0.693
AFZ36867.1
Metallophosphoesterase; PFAM: Calcineurin-like phosphoesterase; TIGRFAM: TIGR04168 family protein; InterPro IPR004843; KEGG: cyh:Cyan8802_4496 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase.
  
     0.683
AFZ36151.1
Chlorophyll synthase; PFAM: UbiA prenyltransferase family; TIGRFAM: bacteriochlorophyll/chlorophyll synthetase; chlorophyll synthase, ChlG; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR011799:IPR006372; KEGG: cyh:Cyan8802_1892 bacteriochlorophyll/chlorophyll a synthase; PFAM: UbiA prenyltransferase; PRIAM: Chlorophyll synthase; SPTR: Chlorophyll synthase, ChlG; TIGRFAM: Chlorophyll synthase, ChlG; Bacteriochlorophyll/chlorophyll synthetase.
 
  
 0.674
AFZ34967.1
Geranylgeranyl reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: geranylgeranyl reductase; geranylgeranyl reductase family; COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR010253:IPR011774:IPR011777:IPR002938; KEGG: syp:SYNPCC7002_A2476 geranylgeranyl reductase; PFAM: Monooxygenase, FAD-binding; SPTR: Geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/cyanobacteria; Geranylgeranyl reductase; Geranylgeranyl reductase, plant/prokaryotic.
 
  
 0.631
AFZ36414.1
Protoporphyrin IX magnesium-chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
 
  
 0.625
AFZ34730.1
PFAM: Protein of unknown function (DUF3067); KEGG: cyc:PCC7424_1769 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.616
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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