STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35954.1PFAM: LD-carboxypeptidase; COGs: COG1619 conserved hypothetical protein; InterPro IPR003507; KEGG: cyp:PCC8801_4434 peptidase U61 LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; SPTR: Peptidase U61 LD-carboxypeptidase A. (313 aa)    
Predicted Functional Partners:
AFZ36624.1
PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; TIGRFAM: D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: cyh:Cyan8802_0897 peptidase S13 D-Ala-D-Ala carboxypeptidase C; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: Peptidase S13 D-Ala-D-Ala carboxypeptidase C.
 
  
 0.668
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
    
 0.631
AFZ35953.1
KEGG: cin:100181560 similar to solute carrier family 7 (cationic amino acid transporter, y+ system), member 6; SPTR: Putative uncharacterized protein.
       0.625
AFZ34503.1
Beta-N-acetylhexosaminidase; PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cyc:PCC7424_1868 glycoside hydrolase family 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Glycoside hydrolase family 3 domain protein.
 
   
 0.569
AFZ35772.1
Penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR017790:IPR005311:IPR001460; KEGG: cyc:PCC7424_2896 penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 2; TIGRFAM: Penicillin-binding protein 2.
    
 0.508
rlpA
Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.
 
 
 
 0.463
tadA
CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
      0.459
AFZ34858.1
COGs: COG2367 Beta-lactamase class A; InterPro IPR001466; KEGG: cyc:PCC7424_0491 putative beta-lactamase protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase, putative.
 
     0.449
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
  
   
 0.433
AFZ37833.1
PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659; KEGG: mar:MAE_24600 peptidase, S9C (acylaminoacyl-peptidase) family protein; PFAM: WD40-like Beta Propeller; SPTR: Peptidase S9 prolyl oligopeptidase active site domain protein.
      0.422
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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