STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ35992.1KEGG: rca:Rcas_1713 hypothetical protein; SPTR: Putative uncharacterized protein. (451 aa)    
Predicted Functional Partners:
AFZ35621.1
PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: cyc:PCC7424_0710 fibronectin-binding A domain protein; PFAM: Fibronectin-binding A, N-terminal; Protein of unknown function DUF814; SPTR: Fibronectin-binding A domain protein.
  
  
 0.678
AFZ35991.1
C-3',4' desaturase CrtD; PFAM: FAD dependent oxidoreductase; TIGRFAM: C-3',4' desaturase CrtD; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014104:IPR006076; KEGG: cyc:PCC7424_3330 C-3',4' desaturase CrtD; PFAM: FAD dependent oxidoreductase; SPTR: C-3',4' desaturase CrtD; TIGRFAM: Myxoxanthophyll biosynthesis, C-3',4' desaturase CrtD.
       0.537
AFZ35993.1
KEGG: cyc:PCC7424_3402 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.463
AFZ35990.1
Protein of unknown function YGGT; PFAM: YGGT family; InterPro IPR003425; KEGG: cyh:Cyan8802_3585 protein of unknown function YGGT; PFAM: Protein of unknown function YGGT; SPTR: Putative uncharacterized protein.
       0.414
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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