STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ36074.1Roadblock/LC7 family protein; PFAM: Roadblock/LC7 domain; COGs: COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid; InterPro IPR004942; KEGG: cyn:Cyan7425_2399 roadblock/LC7 family protein; PFAM: Dynein light chain-related; SPTR: Roadblock/LC7 family protein. (199 aa)    
Predicted Functional Partners:
AFZ36075.1
Protein of unknown function ATP binding protein; PFAM: Miro-like protein; TIGRFAM: small GTP-binding protein domain; COGs: COG2229 GTPase; InterPro IPR004130; KEGG: cyn:Cyan7425_5250 protein of unknown function ATP binding; PFAM: Protein of unknown function, ATP binding; SPTR: Putative uncharacterized protein.
 
 
 0.998
AFZ36076.1
KEGG: cyn:Cyan7425_2402 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.860
AFZ36073.1
KEGG: cyn:Cyan7425_2398 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.546
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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