Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFZ36079.1 | AFZ36080.1 | Sta7437_2546 | Sta7437_2547 | Hypothetical protein; KEGG: pfa:PF10_0096 conserved Plasmodium protein; SPTR: Conserved Plasmodium protein. | PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442:IPR020635:IPR002290; KEGG: ana:alr3877 serine/threonine kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase. | 0.501 |
AFZ36080.1 | AFZ36079.1 | Sta7437_2547 | Sta7437_2546 | PFAM: Protein kinase domain; COGs: COG0515 Serine/threonine protein kinase; InterPro IPR017442:IPR020635:IPR002290; KEGG: ana:alr3877 serine/threonine kinase; PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain; SPTR: Serine/threonine kinase. | Hypothetical protein; KEGG: pfa:PF10_0096 conserved Plasmodium protein; SPTR: Conserved Plasmodium protein. | 0.501 |