STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ36552.1PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR000357; KEGG: npu:Npun_R0734 heat domain-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT; SPTR: HEAT domain containing protein. (218 aa)    
Predicted Functional Partners:
AFZ36551.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: cyc:PCC7424_5726 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
 
     0.891
AFZ37758.1
PFAM: PBS lyase HEAT-like repeat; InterPro IPR004155; KEGG: ter:Tery_0990 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT-like repeat.
  
     0.775
cpcS
CpeU protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.773
AFZ36856.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: Adaptin N terminal region; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR000357; KEGG: npu:Npun_R3805 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; HEAT; SPTR: PBS lyase HEAT domain protein repeat-containing protein CpeZ.
  
     0.773
AFZ33865.1
15,16-dihydrobiliverdin:ferredoxin oxidoreductase; PFAM: Ferredoxin-dependent bilin reductase; InterPro IPR009249; KEGG: ter:Tery_5051 dihydrobiliverdin:ferredoxin oxidoreductase; PFAM: Ferredoxin-dependent bilin reductase; PRIAM: 15,16-dihydrobiliverdin:ferredoxin oxidoreductase; SPTR: Ferredoxin-dependent bilin reductase; Belongs to the HY2 family.
  
     0.772
cpcT-2
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.772
AFZ36857.1
Phycocyanin; PFAM: Phycobilisome protein; InterPro IPR012128; KEGG: ter:Tery_0996 phycobilisome protein; PFAM: Phycobilisome, alpha/beta subunit; SPTR: Phycobilisome protein.
  
   
 0.772
AFZ37336.1
PBS lyase HEAT domain protein repeat-containing protein; PFAM: PBS lyase HEAT-like repeat; HEAT repeat; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155; KEGG: npu:Npun_F3804 heat repeat-containing PBS lyase; PFAM: PBS lyase HEAT-like repeat; SPTR: PBS lyase HEAT domain protein repeat-containing protein CpeF.
  
     0.772
AFZ37757.1
HEAT domain containing protein; InterPro IPR004155:IPR000357; KEGG: gvi:gvip157 putative phycoerythrin lyase subunit; PFAM: HEAT; PBS lyase HEAT-like repeat; SPTR: CpeZ protein.
  
     0.771
pebB
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
  
     0.768
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.