STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ36645.1HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR005834; KEGG: cyc:PCC7424_4325 HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3. (233 aa)    
Predicted Functional Partners:
AFZ36416.1
HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: mrd:Mrad2831_0647 HAD family hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase, putative; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily h [...]
 
  
 0.706
AFZ36609.1
Adenylylsulfate kinase; PFAM: Zeta toxin; COGs: COG2187 conserved hypothetical protein; InterPro IPR002891; KEGG: npu:Npun_F0614 hypothetical protein; PFAM: Adenylylsulphate kinase, C-terminal; SPTR: Putative uncharacterized protein.
  
    0.612
AFZ36644.1
Methyltransferase type 11; PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: cyc:PCC7424_4324 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase, UbiE/COQ5 family.
  
    0.592
AFZ36643.1
KEGG: npu:Npun_F4359 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.405
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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