STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ36694.1PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: rba:RB13231 hypothetical protein; PFAM: Peptidase M42; SPTR: Putative uncharacterized protein. (366 aa)    
Predicted Functional Partners:
AFZ36693.1
Hypothetical protein; PFAM: Domain of unknown function DUF37; KEGG: cyn:Cyan7425_3440 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.471
AFZ36692.1
Hypothetical protein; KEGG: dpe:Dper_GL11212 GL11212 gene product from transcript GL11212-RA; SPTR: GL11212.
       0.457
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.