STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ36987.1PFAM: YcfA-like protein; InterPro IPR012933; KEGG: mar:MAE_44090 hypothetical protein; PFAM: YcfA-like; SPTR: Putative uncharacterized protein. (67 aa)    
Predicted Functional Partners:
AFZ36988.1
PFAM: Uncharacterised protein family (UPF0150); InterPro IPR005357; KEGG: syn:ssr0336 hypothetical protein; PFAM: Uncharacterised protein family UPF0150; SPTR: Putative uncharacterized protein.
 
 
   0.917
AFZ36986.1
Cobaltochelatase CobN subunit; PFAM: Domain of unknown function (DUF3479); CobN/Magnesium Chelatase; TIGRFAM: magnesium chelatase, H subunit; COGs: COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatase; InterPro IPR003672:IPR011771; KEGG: cyc:PCC7424_4108 magnesium chelatase, H subunit; PFAM: CobN/magnesium chelatase; PRIAM: Magnesium chelatase; SPTR: Magnesium chelatase, H subunit; TIGRFAM: Magnesium-chelatase, subunit H.
       0.705
AFZ36050.1
COGs: COG5499 transcription regulator containing HTH domain; KEGG: mar:MAE_06950 hypothetical protein; SPTR: Similar to tr|Q8YMS4|Q8YMS4.
  
   
 0.539
AFZ36822.1
PFAM: Plasmid pRiA4b ORF-3-like protein; KEGG: cyn:Cyan7425_4772 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.524
AFZ35013.1
PFAM: Predicted periplasmic protein (DUF2233); KEGG: npu:Npun_R0608 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.491
AFZ37494.1
KEGG: cyh:Cyan8802_0168 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.467
AFZ36114.1
KEGG: cyh:Cyan8802_4398 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.429
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.