STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37028.1Hypothetical protein; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: syp:SYNPCC7002_F0007 hypothetical protein; SPTR: ATP-dependent nuclease subunit B-like protein. (908 aa)    
Predicted Functional Partners:
AFZ37811.1
PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: syp:SYNPCC7002_F0008 ATP-dependent nuclease subunit A; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; Belongs to the helicase family. UvrD subfamily.
 
 
 0.996
AFZ34139.1
KEGG: cyn:Cyan7425_5335 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.957
AFZ37029.1
KEGG: mar:MAE_14500 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.757
AFZ37641.1
KEGG: npu:Npun_F1375 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.745
AFZ36130.1
KEGG: cyp:PCC8801_3358 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.725
AFZ35273.1
PFAM: GDSL-like Lipase/Acylhydrolase; KEGG: bln:Blon_1906 electron transport complex, RnfABCDGE type, D subunit; SPTR: Putative electron transport complex, RnfABCDGE type, D subunit.
  
     0.700
AFZ37524.1
PFAM: Phytanoyl-CoA dioxygenase (PhyH); COGs: COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; InterPro IPR008775; KEGG: apb:SAR116_0276 hypothetical protein; PFAM: Phytanoyl-CoA dioxygenase; SPTR: Putative uncharacterized protein.
  
     0.662
def
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.
       0.641
AFZ37770.1
PFAM: Protein of unknown function (DUF1003); COGs: COG4420 membrane protein; KEGG: dra:DR_A0362 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.573
AFZ36172.1
Forkhead-associated protein; PFAM: FHA domain; InterPro IPR000253; KEGG: amr:AM1_4519 hypothetical protein; PFAM: Forkhead-associated; SMART: Forkhead-associated; SPTR: FHA domain containing protein.
  
     0.552
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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