STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37161.1PFAM: Sodium Bile acid symporter family; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657; KEGG: bpf:BpOF4_18100 bile acid:sodium symporter; PFAM: Bile acid:sodium symporter; SPTR: Arsenical-resistance protein; possible sodium/bile acid symporter family. (315 aa)    
Predicted Functional Partners:
AFZ37162.1
PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: ava:Ava_0244 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1.
       0.563
AFZ34564.1
PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: ank:AnaeK_4019 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Protein tyrosine phosphatase; manually curated.
 
  
 0.413
AFZ37163.1
Transcriptional regulator of molybdate metabolism, XRE family; PFAM: Helix-turn-helix; COGs: COG1910 Periplasmic molybdate-binding protein/domain; InterPro IPR001387; KEGG: ava:Ava_4042 molybdate metabolism transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional Regulator of molybdate metabolism, XRE family protein.
 
     0.404
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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