STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37181.1KEGG: cyp:PCC8801_0949 hypothetical protein; SPTR: Putative uncharacterized protein. (74 aa)    
Predicted Functional Partners:
AFZ37182.1
PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: cyc:PCC7424_2378 peptidase M48 Ste24p; PFAM: Peptidase M48; SPTR: Peptidase, M48 family.
       0.773
AFZ37183.1
KEGG: syn:ssr2130 hypothetical protein; SPTR: Ssr2130 protein.
       0.488
AFZ37184.1
PFAM: Protein of unknown function (DUF3326); KEGG: cyc:PCC7424_0615 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.488
AFZ37185.1
Abortive infection protein; PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: cyc:PCC7424_0616 abortive infection protein; PFAM: Abortive infection protein; SPTR: Abortive infection protein.
       0.488
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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