STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37275.1Transcriptional regulator, AbrB family; PFAM: SpoVT / AbrB like domain; TIGRFAM: looped-hinge helix DNA binding domain, AbrB family; InterPro IPR006339:IPR007159; KEGG: cyh:Cyan8802_2466 transcriptional regulator, AbrB family; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Transcriptional regulator, AbrB family; TIGRFAM: Transcription regulator AbrB. (80 aa)    
Predicted Functional Partners:
AFZ37276.1
PFAM: PemK-like protein; KEGG: cyh:Cyan8802_2467 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.774
AFZ37274.1
PFAM: Plasmid maintenance system killer protein; InterPro IPR007711; KEGG: rpi:Rpic_3169 plasmid maintenance system killer; PFAM: Plasmid maintenance system killer; SPTR: NADH dehydrogenase subunit H.
     
 0.509
AFZ37273.1
Plasmid maintenance system antidote protein, XRE family; PFAM: Helix-turn-helix; Domain of unknown function (DUF955); TIGRFAM: addiction module antidote protein, HigA family; COGs: COG3093 Plasmid maintenance system antidote protein; InterPro IPR013430:IPR001387:IPR010359; KEGG: cyn:Cyan7425_1808 XRE family plasmid maintenance system antidote protein; PFAM: Helix-turn-helix type 3; Protein of unknown function DUF955; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module antidote protein, HigA.
       0.463
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.