STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37320.1PFAM: Probable transposase; TIGRFAM: transposase, IS605 OrfB family, central region; InterPro IPR010095; KEGG: afr:AFE_1328 transposase, IS605 OrfB family protein, putative; SPTR: Putative uncharacterized protein; TIGRFAM: Transposase, IS605 OrfB, C-terminal. (448 aa)    
Predicted Functional Partners:
AFZ36228.1
TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; COGs: COG1203 helicase; InterPro IPR001650:IPR006483:IPR006474:IPR014001; KEGG: cyt:cce_1194 hypothetical protein; PFAM: DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain.
  
     0.703
AFZ36226.1
TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP; InterPro IPR010154:IPR013414; KEGG: cyt:cce_1196 putative CRISPR-associated negative autoregulator; SPTR: Putative CRISPR-associated negative autoregulator; TIGRFAM: CRISPR-associated negative autoregulator; CRISPR-associated regulatory DevR.
  
     0.660
AFZ35923.1
KEGG: cyc:PCC7424_4099 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.634
AFZ35798.1
KEGG: cyt:cce_4311 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.625
AFZ37146.1
PFAM: Acyltransferase family; COGs: COG1835 acyltransferase; InterPro IPR002656; KEGG: sfu:Sfum_3552 acyltransferase 3; PFAM: Acyltransferase 3; SPTR: Acyltransferase 3.
  
     0.624
AFZ36229.1
PFAM: Cas6 Crispr; TIGRFAM: CRISPR-associated protein Cas6, subtype MYXAN; InterPro IPR014174; KEGG: cyt:cce_1193 hypothetical protein; PFAM: CRISPR-associated protein, Cas6-related; SPTR: Putative uncharacterized protein; TIGRFAM: CRISPR-associated protein, Cas6-related.
  
     0.597
AFZ34374.1
TIGRFAM: methyltransferase, FkbM family; InterPro IPR006342; KEGG: chl:Chy400_3909 methyltransferase FkbM family; SPTR: Methyltransferase FkbM family; TIGRFAM: Methyltransferase FkbM.
  
     0.588
AFZ37645.1
KEGG: npu:Npun_F2448 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.573
AFZ37319.1
Transposase IS200-family protein; PFAM: Transposase IS200 like; COGs: COG1943 Transposase and inactivated derivatives; InterPro IPR002686; KEGG: ttm:Tthe_0957 transposase IS200-family protein; PFAM: Transposase IS200-like; SPTR: Transposase IS200-family protein.
  
    0.570
cas2-2
CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
  
     0.568
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.