STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37331.1PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: cyh:Cyan8802_1427 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23. (204 aa)    
Predicted Functional Partners:
AFZ37382.1
PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: npu:Npun_F4149 peptidase M23B; PFAM: Peptidase M23; SPTR: M23 peptidase domain protein.
  
     0.756
AFZ35791.1
PFAM: Transglycosylase SLT domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: cyh:Cyan8802_3701 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Lytic transglycosylase catalytic.
 
   
 0.505
AFZ34322.1
PFAM: Transglycosylase SLT domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR019734:IPR008258; KEGG: cyc:PCC7424_2854 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Transglycosylase SLT domain protein.
 
   
 0.457
AFZ33884.1
SpoIID/LytB domain protein; PFAM: Stage II sporulation protein; TIGRFAM: SpoIID/LytB domain; COGs: COG2385 Sporulation protein and related protein; InterPro IPR013486:IPR013693; KEGG: cyc:PCC7424_0278 SpoIID/LytB domain protein; PFAM: Sporulation stage II protein D, amidase enhancer LytB N-terminal; SPTR: SpoIID/LytB domain protein; TIGRFAM: Sporulation stage II protein D, amidase enhancer LytB.
 
   
 0.427
AFZ37205.1
PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; FHA domain; TIGRFAM: penicillin-binding protein, 1A family; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR000253:IPR001264:IPR001460:IPR011816; KEGG: cyc:PCC7424_3011 FHA modulated glycosyl transferase/transpeptidase; PFAM: Glycosyl transferase, family 51; Forkhead-associated; Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SMART: Forkhead-associated; SPTR: FHA modulated glycosyl transferase/transpeptidase; TIGRFAM: Penicillin-binding protein 1A.
 
   
 0.408
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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