STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFZ37437.1KEGG: syp:SYNPCC7002_A1306 hypothetical protein; SPTR: Putative uncharacterized protein. (254 aa)    
Predicted Functional Partners:
AFZ37436.1
Hypothetical protein; KEGG: syp:SYNPCC7002_A1305 surface protein SdrI, putative; SPTR: Putative uncharacterized protein.
       0.619
AFZ37438.1
KEGG: ava:Ava_0489 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.556
AFZ37435.1
KEGG: npu:Npun_R4877 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.443
AFZ37434.1
Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; PFAM: D-alanyl-D-alanine carboxypeptidase; COGs: COG1876 D-alanyl-D-alanine carboxypeptidase; InterPro IPR003709; KEGG: cyc:PCC7424_1196 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; SPTR: Peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin.
       0.402
Your Current Organism:
Stanieria cyanosphaera
NCBI taxonomy Id: 111780
Other names: Dermocarpa sp. PCC 7437, S. cyanosphaera PCC 7437, Stanieria cyanosphaera PCC 7437, Stanieria cyanosphaera str. PCC 7437, Stanieria sp. ATCC 29371, Stanieria sp. PCC 7437
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