Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFY39436.1KEGG: syp:SYNPCC7002_A0990 hypothetical protein; SPTR: Putative uncharacterized protein. (131 aa)    
Predicted Functional Partners:
uvrC
Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
     
 0.816
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
       0.811
AFY39146.1
PFAM: Protein of unknown function (DUF2854); KEGG: syp:SYNPCC7002_A2400 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.779
psb28
PFAM: Psb28 protein; TIGRFAM: photosystem II reaction center protein Psb28; HAMAP: Photosystem II protein Psb28, class 1; InterPro IPR005610; KEGG: syp:SYNPCC7002_A1258 photosystem II reaction center protein Psb28; PFAM: Photosystem II protein Psb28, class 1; SPTR: Photosystem II reaction center Psb28 protein; TIGRFAM: Photosystem II protein Psb28, class 1; Belongs to the Psb28 family.
  
   
 0.774
AFY38539.1
PFAM: Protein of unknown function (DUF2930); KEGG: syp:SYNPCC7002_A2729 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.773
AFY39608.1
PFAM: Protein of unknown function (DUF3464); KEGG: syp:SYNPCC7002_A1824 hypothetical protein; SPTR: Hypothetical ABC-type Co2+ transport system permease component.
  
     0.773
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...]
     
  0.772
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.771
AFY37363.1
Heat shock protein DnaJ domain protein; PFAM: Protein of unknown function (DUF3353); InterPro IPR001623; KEGG: syp:SYNPCC7002_A0932 DnaJ domain-containing protein; PFAM: Heat shock protein DnaJ, N-terminal; SPTR: DnaJ domain protein.
  
     0.770
AFY39705.1
PFAM: Protein of unknown function (DUF3067); KEGG: syp:SYNPCC7002_A1908 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.770
Your Current Organism:
Leptolyngbya sp. PCC7376
NCBI taxonomy Id: 111781
Other names: Enugrolinea bermudensis PCC 7376, L. sp. PCC 7376, Leptolyngbya PCC7376, Leptolyngbya sp. PCC 7376
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