Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AFY40628.1Hypothetical protein; KEGG: mpi:Mpet_1953 aldehyde dehydrogenase; SPTR: Putative uncharacterized protein. (273 aa)    
Predicted Functional Partners:
AFY40629.1
Hypothetical protein; KEGG: nth:Nther_1904 amidohydrolase 3; SPTR: Amidohydrolase 3.
       0.528
AFY40627.1
KEGG: pyo:PY07055 hypothetical protein; SPTR: Putative uncharacterized protein PY07055.
       0.489
AFY40630.1
Hypothetical protein; KEGG: cai:Caci_8449 putative anti-sigma regulatory factor, serine/threonine protein kinase; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase.
       0.420
Your Current Organism:
Leptolyngbya sp. PCC7376
NCBI taxonomy Id: 111781
Other names: Enugrolinea bermudensis PCC 7376, L. sp. PCC 7376, Leptolyngbya PCC7376, Leptolyngbya sp. PCC 7376
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