STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yafBPutative aldose reductase. (276 aa)    
Predicted Functional Partners:
CCE95615.1
Putative serine protein kinase.
   
    0.726
CCE97169.1
Aldo-keto reductase family 1 member C1 homolog.
 
 
 0.687
rkpA
Type I polyketide synthase RkpA.
  
 
 0.678
otsB
Putative trehalose-6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.600
tam
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
  
    0.576
CCE98361.1
Aldo-keto reductase family 1 member C1 homolog 20-alpha-hydroxysteroid dehydrogenase; 20-alpha-HSD; Dihydrodiol dehydrogenase 1; DD-1; DD1.
 
 
0.550
sodC
Superoxide dismutase (Cu/Zn); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
   
 
 0.544
CCE96609.1
Aldo-keto reductase family 1 member C1 homolog.
 
 
 0.543
dhe
Haloacid dehalogenase, type II.
  
  
 0.532
CCE97048.1
Flavodoxin, putative precursor.
    0.532
Your Current Organism:
Sinorhizobium fredii HH103
NCBI taxonomy Id: 1117943
Other names: S. fredii HH103, Sinorhizobium fredii str. HH103, Sinorhizobium fredii strain HH103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.