STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCE95383.1Predicted membrane protein/domain. (154 aa)    
Predicted Functional Partners:
CCE95100.1
Conserved hypothetical protein.
  
     0.722
CCE97779.1
RNA-binding S4 domain protein.
  
    0.682
CCE98015.1
Putative transmembrane protein.
 
    0.670
hemB
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
       0.613
mucS
Exopolysaccharide II synthesis transcriptional activator expG.
 
    0.587
CCE95080.1
Invasion protein B-like.
  
     0.569
CCE96404.1
Transcriptional regulator, TetR family.
  
     0.562
bpt
arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
     
 0.557
CCE96035.1
Putative CheA signal transduction histidine kinase.
 
   
 0.548
CCE95513.1
Hypothetical protein.
  
     0.535
Your Current Organism:
Sinorhizobium fredii HH103
NCBI taxonomy Id: 1117943
Other names: S. fredii HH103, Sinorhizobium fredii str. HH103, Sinorhizobium fredii strain HH103
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.