Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CCE97233.1 | CCE98438.1 | SFHH103_02739 | SFHH103_03947 | Putative permease of the drug/metabolite transporter (DMT) superfamily. | Putative transmembrane protein. | 0.464 |
CCE98436.1 | CCE98437.1 | SFHH103_03945 | SFHH103_03946 | Conserved hypothetical protein. | B3/B4 tRNA-binding domain protein. | 0.534 |
CCE98436.1 | CCE98438.1 | SFHH103_03945 | SFHH103_03947 | Conserved hypothetical protein. | Putative transmembrane protein. | 0.516 |
CCE98437.1 | CCE98436.1 | SFHH103_03946 | SFHH103_03945 | B3/B4 tRNA-binding domain protein. | Conserved hypothetical protein. | 0.534 |
CCE98437.1 | CCE98438.1 | SFHH103_03946 | SFHH103_03947 | B3/B4 tRNA-binding domain protein. | Putative transmembrane protein. | 0.764 |
CCE98437.1 | CCE98439.1 | SFHH103_03946 | SFHH103_03948 | B3/B4 tRNA-binding domain protein. | Transcriptional regulator, AraC family. | 0.618 |
CCE98438.1 | CCE97233.1 | SFHH103_03947 | SFHH103_02739 | Putative transmembrane protein. | Putative permease of the drug/metabolite transporter (DMT) superfamily. | 0.464 |
CCE98438.1 | CCE98436.1 | SFHH103_03947 | SFHH103_03945 | Putative transmembrane protein. | Conserved hypothetical protein. | 0.516 |
CCE98438.1 | CCE98437.1 | SFHH103_03947 | SFHH103_03946 | Putative transmembrane protein. | B3/B4 tRNA-binding domain protein. | 0.764 |
CCE98438.1 | CCE98439.1 | SFHH103_03947 | SFHH103_03948 | Putative transmembrane protein. | Transcriptional regulator, AraC family. | 0.631 |
CCE98438.1 | CCE98440.1 | SFHH103_03947 | SFHH103_03949 | Putative transmembrane protein. | Putative transcriptional regulator, XRE family. | 0.406 |
CCE98439.1 | CCE98437.1 | SFHH103_03948 | SFHH103_03946 | Transcriptional regulator, AraC family. | B3/B4 tRNA-binding domain protein. | 0.618 |
CCE98439.1 | CCE98438.1 | SFHH103_03948 | SFHH103_03947 | Transcriptional regulator, AraC family. | Putative transmembrane protein. | 0.631 |
CCE98439.1 | CCE98440.1 | SFHH103_03948 | SFHH103_03949 | Transcriptional regulator, AraC family. | Putative transcriptional regulator, XRE family. | 0.547 |
CCE98440.1 | CCE98438.1 | SFHH103_03949 | SFHH103_03947 | Putative transcriptional regulator, XRE family. | Putative transmembrane protein. | 0.406 |
CCE98440.1 | CCE98439.1 | SFHH103_03949 | SFHH103_03948 | Putative transcriptional regulator, XRE family. | Transcriptional regulator, AraC family. | 0.547 |