STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI31858.1Protein TonB. (287 aa)    
Predicted Functional Partners:
SHI31885.1
Biopolymer transport protein ExbD.
 
 
 0.986
SHI31911.1
Biopolymer transport protein ExbD/TolR.
 
 
 0.986
SHI31941.1
Biopolymer transport protein ExbB.
 
 
 0.958
SHI31806.1
Phosphate transport system substrate-binding protein.
 
     0.904
SHI31779.1
Tfp pilus assembly protein PilF.
 
 
   0.886
SHI50082.1
Hypothetical protein.
  
   0.856
SHI55877.1
Outer membrane receptor proteins, mostly Fe transport.
  
   0.830
SHJ01203.1
Outer membrane transport energization protein ExbD.
  
 
 0.811
SHI35091.1
Outer membrane receptor proteins, mostly Fe transport.
  
   0.799
SHI65691.1
Hypothetical protein.
  
   0.798
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.