STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI38245.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
SHI38308.1
Cytochrome c oxidase accessory protein FixG.
 
     0.957
SHI38276.1
FixH protein.
 
     0.927
SHI38342.1
Cytochrome c oxidase cbb3-type subunit 3.
 
     0.917
SHI38402.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
     0.917
SHI38469.1
Cu+-exporting ATPase.
 
     0.872
SHI38438.1
Cytochrome oxidase maturation protein, cbb3-type.
 
     0.803
SHI55664.1
Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
     0.691
SHI38218.1
Hypothetical protein.
       0.631
SHI38178.1
Acyl-CoA hydrolase.
       0.606
SHI38373.1
Cbb3-type cytochrome oxidase, subunit 3.
       0.605
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.