STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI66491.1Hypothetical protein. (939 aa)    
Predicted Functional Partners:
SHI35091.1
Outer membrane receptor proteins, mostly Fe transport.
  
     0.756
SHJ05985.1
Tape measure domain-containing protein.
  
     0.711
SHI75574.1
Por secretion system C-terminal sorting domain-containing protein.
  
  
  0.695
SHI66529.1
Hypothetical protein.
       0.682
SHJ24966.1
Outer membrane receptor for ferrienterochelin and colicins.
  
 
   0.629
SHI65283.1
Protein of unknown function.
  
     0.618
SHJ05600.1
Phage uncharacterized protein (putative large terminase), C-terminal domain-containing protein.
  
     0.617
SHJ06470.1
YD repeat-containing protein.
  
 0.578
SHI38803.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.558
SHJ13052.1
Subtilase family protein; Belongs to the peptidase S8 family.
    
  0.547
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.