STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI84138.1Acyl-CoA dehydrogenase. (592 aa)    
Predicted Functional Partners:
SHI84217.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.997
SHI49453.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.990
SHI49489.1
Electron transfer flavoprotein beta subunit.
 
 
 0.971
SHI84176.1
acetyl-CoA acyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.960
SHI37942.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.865
SHI55491.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 0.852
SHI84260.1
DNA-binding transcriptional regulator, MarR family.
 
  
 0.814
SHJ18060.1
methylglutaconyl-CoA hydratase.
  
  0.760
SHI67216.1
Acetyl-CoA carboxylase, carboxyltransferase component.
 
 
 0.741
SHJ18030.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
  0.719
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
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