STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI90687.1Multiple antibiotic resistance protein. (199 aa)    
Predicted Functional Partners:
SHI90657.1
Hypothetical protein.
       0.682
SHI90712.1
Oxygen tolerance.
       0.652
SHI90733.1
Tetratricopeptide repeat-containing protein.
       0.642
SHI90759.1
Ca-activated chloride channel family protein.
       0.462
SHI90793.1
Ca-activated chloride channel family protein.
       0.462
SHI90848.1
Oxygen tolerance.
       0.462
SHI90879.1
Protein of unknown function DUF58.
       0.461
SHI90911.1
MoxR-like ATPase.
       0.400
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.