STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI91836.1Mannose-6-phosphate isomerase, type 2. (115 aa)    
Predicted Functional Partners:
SHJ00937.1
Mannose-1-phosphate guanylyltransferase (GDP).
  
  0.954
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
 
 0.854
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
    
  0.808
SHI91877.1
Capsular exopolysaccharide family.
  
 
 0.756
fbp
Fructose-1,6-bisphosphatase I; Belongs to the FBPase class 1 family.
    
  0.702
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.687
SHI97406.1
Phosphomannomutase.
  
 
 0.685
SHI91558.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
  
 
 0.656
SHI91658.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.572
SHI91626.1
Parallel beta-helix repeat (two copies).
       0.543
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.