STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI92020.1Glycosyltransferase involved in cell wall bisynthesis. (392 aa)    
Predicted Functional Partners:
SHI92089.1
UDP-2-acetamido-2,6-beta-L-arabino-hexul-4-ose reductase.
 
 
 0.956
SHI92056.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
 
    0.918
SHI92117.1
UDP-glucose 4-epimerase.
 
    0.776
SHI91990.1
Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid).
    0.742
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.706
SHI91960.1
Acetyltransferase EpsM.
  
    0.644
SHI92380.1
Membrane protein involved in the export of O-antigen and teichoic acid.
  
    0.599
SHI92159.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.573
SHI92193.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.573
SHI92231.1
O-antigen polysaccharide polymerase Wzy.
       0.573
Your Current Organism:
Cruoricaptor ignavus
NCBI taxonomy Id: 1118202
Other names: C. ignavus, CCUG 62025, Cruoricaptor ignavus Yassin et al. 2013, DSM 25479, Flavobacteriaceae bacterium IMMIB L-12475, IMMIB L-12475
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