STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB01690.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (177 aa)    
Predicted Functional Partners:
ORB01691.1
Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
ORB04588.1
XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.722
ORB01725.1
Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.722
ORB01689.1
Dihydrodipicolinate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.
 
     0.662
ORB03716.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.403
Your Current Organism:
Mycolicibacter minnesotensis
NCBI taxonomy Id: 1118379
Other names: DSM 45633, JCM 17932, M. minnesotensis, Mycobacterium minnesotense, Mycobacterium minnesotense Hannigan et al. 2013, Mycobacterium sp. DL150B, Mycobacterium sp. DL184, Mycobacterium sp. DL189, Mycobacterium sp. DL215A, Mycobacterium sp. DL228B, Mycobacterium sp. DL47, Mycobacterium sp. DL477, Mycobacterium sp. DL482, Mycobacterium sp. DL49, Mycobacterium sp. DL604, Mycobacterium sp. DL630, Mycobacterium sp. DL678A, Mycobacterium sp. DL685, Mycolicibacter minnesotensis (Hannigan et al. 2013) Gupta et al. 2018, NCCB 100399, strain DL49
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.