STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORA98001.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (322 aa)    
Predicted Functional Partners:
Mce1F
MCE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
Mce1C
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.932
Mce1D
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.891
ORA97965.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.862
ORA97966.1
Mce protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.859
ORA97970.1
MCE-family protein MCE1A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.850
ORA97964.1
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.847
LprK
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.846
Mce1B
Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.783
ORA97963.1
DUF1275 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
Your Current Organism:
Mycolicibacter minnesotensis
NCBI taxonomy Id: 1118379
Other names: DSM 45633, JCM 17932, M. minnesotensis, Mycobacterium minnesotense, Mycobacterium minnesotense Hannigan et al. 2013, Mycobacterium sp. DL150B, Mycobacterium sp. DL184, Mycobacterium sp. DL189, Mycobacterium sp. DL215A, Mycobacterium sp. DL228B, Mycobacterium sp. DL47, Mycobacterium sp. DL477, Mycobacterium sp. DL482, Mycobacterium sp. DL49, Mycobacterium sp. DL604, Mycobacterium sp. DL630, Mycobacterium sp. DL678A, Mycobacterium sp. DL685, Mycolicibacter minnesotensis (Hannigan et al. 2013) Gupta et al. 2018, NCCB 100399, strain DL49
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.